Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm12173-201ENSMUST00000117622 273 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm13902-201ENSMUST00000120168 605 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm14927-201ENSMUST00000120283 454 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm14649-201ENSMUST00000121814 324 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm15038-201ENSMUST00000122144 296 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm23792-201ENSMUST00000122557 93 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm22135-201ENSMUST00000158752 108 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm24734-201ENSMUST00000158860 262 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm38166-201ENSMUST00000191660 471 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm35702-201ENSMUST00000198653 511 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm7117-201ENSMUST00000071515 387 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nup88Q8CEC0 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm15103-201ENSMUST00000119893 871 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm14363-201ENSMUST00000122304 409 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm22501-201ENSMUST00000158981 127 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm9931-201ENSMUST00000193584 1185 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm3933-201ENSMUST00000195391 439 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm44392-201ENSMUST00000196758 115 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm43368-201ENSMUST00000200638 409 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm7468-201ENSMUST00000203900 652 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm18598-201ENSMUST00000207724 597 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm18338-201ENSMUST00000222381 560 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nup88Q8CEC0 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm24340-201ENSMUST00000104208 97 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm24281-201ENSMUST00000104234 136 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm25317-201ENSMUST00000116824 129 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm15151-201ENSMUST00000117106 177 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm5757-201ENSMUST00000117494 528 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm12103-201ENSMUST00000121892 362 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm26254-201ENSMUST00000122491 118 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm11281-201ENSMUST00000141391 576 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm16303-201ENSMUST00000161498 390 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm25999-201ENSMUST00000175398 133 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm8296-201ENSMUST00000185597 524 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm38216-201ENSMUST00000194872 1214 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms