Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm29552-201ENSMUST00000190548 660 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm29490-201ENSMUST00000190923 342 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm37353-201ENSMUST00000194497 313 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm42694-201ENSMUST00000196951 358 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm43308-201ENSMUST00000197236 373 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm17951-201ENSMUST00000198536 496 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Ighv1-68-201ENSMUST00000198789 294 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm45246-201ENSMUST00000210820 367 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 AC073947.3-201ENSMUST00000215576 766 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 AC107369.1-201ENSMUST00000227373 860 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm38152-201ENSMUST00000195389 3566 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm22072-201ENSMUST00000116850 121 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm14670-201ENSMUST00000117327 337 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm13162-201ENSMUST00000121481 454 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm15111-201ENSMUST00000122142 878 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm15075-201ENSMUST00000122187 477 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm25979-201ENSMUST00000157177 138 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm22789-201ENSMUST00000157884 130 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm24939-201ENSMUST00000158325 137 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Mir6341-201ENSMUST00000183490 121 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Mir6414-201ENSMUST00000183685 82 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm27940-201ENSMUST00000184449 98 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm29216-201ENSMUST00000187117 492 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Mir6375-201ENSMUST00000197176 95 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm44409-201ENSMUST00000198810 166 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm43345-201ENSMUST00000199484 269 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm2829-201ENSMUST00000213121 499 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm18729-201ENSMUST00000217230 621 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 AC131677.1-201ENSMUST00000218721 535 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 AC140209.1-204ENSMUST00000226736 739 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Gm23928-201ENSMUST00000082469 145 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 AC133076.2-201ENSMUST00000227678 3532 ntBASIC6.32□□□□□ -1.4
Usp40Q8BWR4 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm15058-201ENSMUST00000117689 458 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm5391-201ENSMUST00000121155 613 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm3111-201ENSMUST00000167426 490 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Adgrg4-206ENSMUST00000168724 531 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm23638-201ENSMUST00000175073 126 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm23158-201ENSMUST00000175076 126 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm22907-201ENSMUST00000175198 126 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm22625-201ENSMUST00000175382 126 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm22875-201ENSMUST00000175449 126 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm25197-201ENSMUST00000175516 126 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm27857-201ENSMUST00000176930 126 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm26268-201ENSMUST00000177685 126 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm23681-201ENSMUST00000178821 126 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Igkv15-97-201ENSMUST00000197637 339 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Gm43406-201ENSMUST00000200356 334 ntBASIC6.31□□□□□ -1.4
Usp40Q8BWR4 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp40Q8BWR4 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms