Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm14365-201ENSMUST00000117535 587 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm5060-201ENSMUST00000120072 599 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm13419-201ENSMUST00000121711 271 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm29228-201ENSMUST00000185489 418 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm7897-201ENSMUST00000193981 554 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm37836-201ENSMUST00000195875 175 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm45735-201ENSMUST00000212779 319 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc40Q8BI79 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm12105-201ENSMUST00000120846 779 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm14577-201ENSMUST00000121134 256 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm24444-201ENSMUST00000157244 308 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm22314-201ENSMUST00000158007 281 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm22135-201ENSMUST00000158752 108 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Ighv8-1-201ENSMUST00000194897 291 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm42438-201ENSMUST00000197832 974 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm45228-201ENSMUST00000206585 352 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm5917-201ENSMUST00000217638 721 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm7381-201ENSMUST00000098958 300 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc40Q8BI79 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm14142-201ENSMUST00000117833 296 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm13607-201ENSMUST00000117875 539 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm11260-201ENSMUST00000121163 942 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm25908-201ENSMUST00000157624 98 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm3053-201ENSMUST00000161709 616 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms