Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm22657-201ENSMUST00000104197 132 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm11393-201ENSMUST00000118019 288 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm15387-201ENSMUST00000120421 648 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm12578-201ENSMUST00000121244 417 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm12317-201ENSMUST00000122307 319 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm26746-201ENSMUST00000181722 487 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm38201-201ENSMUST00000192143 387 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm44099-201ENSMUST00000203299 112 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm5518-201ENSMUST00000084171 648 ntBASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Tpm4Q6IRU2 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm42446-201ENSMUST00000199783 3284 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm15613-201ENSMUST00000118396 326 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm12757-201ENSMUST00000119465 800 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm15075-201ENSMUST00000122187 477 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm26148-201ENSMUST00000157430 68 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm18604-201ENSMUST00000172535 558 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm28615-201ENSMUST00000187527 482 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm28655-201ENSMUST00000191538 692 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm20177-201ENSMUST00000203705 334 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm45209-201ENSMUST00000207122 353 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm44852-201ENSMUST00000207950 369 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Tpm4Q6IRU2 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm37936-201ENSMUST00000194647 1322 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm37407-201ENSMUST00000194793 1316 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm42484-201ENSMUST00000196075 2104 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm22269-201ENSMUST00000104002 130 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm15148-201ENSMUST00000117602 156 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm9078-201ENSMUST00000119126 617 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm14687-201ENSMUST00000120206 363 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm1866-201ENSMUST00000120701 477 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm14977-201ENSMUST00000121626 812 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm23228-201ENSMUST00000157296 270 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Tpm4Q6IRU2 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm44972-201ENSMUST00000206419 406 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4□□□□□ -1.77
Tpm4Q6IRU2 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC4□□□□□ -1.77
Tpm4Q6IRU2 AC187103.4-202ENSMUST00000225091 230 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Tpm4Q6IRU2 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4□□□□□ -1.77
Tpm4Q6IRU2 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Tpm4Q6IRU2 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4□□□□□ -1.77
Tpm4Q6IRU2 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Tpm4Q6IRU2 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 Gm16082-201ENSMUST00000115992 377 ntBASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 Gm22816-201ENSMUST00000157450 117 ntBASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 Gm23257-201ENSMUST00000158322 132 ntBASIC3.99□□□□□ -1.77
Tpm4Q6IRU2 Gm5263-201ENSMUST00000163646 601 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms