Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Foxc1Q61572 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC4.8□□□□□ -1.64
Foxc1Q61572 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Foxc1Q61572 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Foxc1Q61572 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Foxc1Q61572 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm42819-201ENSMUST00000199630 5121 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm37423-201ENSMUST00000194246 3342 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 AC154406.1-201ENSMUST00000215220 2529 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm23705-201ENSMUST00000104370 130 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm15783-201ENSMUST00000117521 633 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm14706-201ENSMUST00000117744 255 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm14926-201ENSMUST00000120650 508 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm13153-201ENSMUST00000120969 637 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm14768-201ENSMUST00000122126 678 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Mir1953-201ENSMUST00000157866 89 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm22428-201ENSMUST00000158554 132 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm23810-201ENSMUST00000175150 74 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Mir6336-201ENSMUST00000183581 130 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Mir6337-201ENSMUST00000184194 105 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm27804-201ENSMUST00000185135 119 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm37493-201ENSMUST00000193167 433 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm43436-201ENSMUST00000199308 147 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm36448-201ENSMUST00000199916 438 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm18320-201ENSMUST00000211304 595 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm45899-201ENSMUST00000212196 1276 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 AC122327.2-201ENSMUST00000220883 120 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 AC122327.3-201ENSMUST00000221852 120 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 AC166341.1-201ENSMUST00000223360 105 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm22684-201ENSMUST00000082849 132 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm22581-201ENSMUST00000083735 136 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm44901-201ENSMUST00000208157 3977 ntBASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Foxc1Q61572 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
Foxc1Q61572 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Foxc1Q61572 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Foxc1Q61572 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Foxc1Q61572 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC4.78□□□□□ -1.64
Foxc1Q61572 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.78□□□□□ -1.64
Foxc1Q61572 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Foxc1Q61572 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Foxc1Q61572 Gm21122-201ENSMUST00000191548 3452 ntBASIC4.78□□□□□ -1.64
Foxc1Q61572 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.78□□□□□ -1.64
Foxc1Q61572 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Foxc1Q61572 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Foxc1Q61572 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Foxc1Q61572 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Foxc1Q61572 Gm26340-201ENSMUST00000102365 99 ntBASIC4.78□□□□□ -1.64
Foxc1Q61572 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Foxc1Q61572 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Foxc1Q61572 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC4.78□□□□□ -1.64
Foxc1Q61572 Gm12842-201ENSMUST00000117298 476 ntBASIC4.78□□□□□ -1.64
Foxc1Q61572 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.78□□□□□ -1.64
Foxc1Q61572 Gm16016-201ENSMUST00000120831 550 ntBASIC4.78□□□□□ -1.64
Foxc1Q61572 Gm12181-201ENSMUST00000121448 531 ntBASIC4.78□□□□□ -1.64
Foxc1Q61572 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.78□□□□□ -1.64
Foxc1Q61572 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC4.78□□□□□ -1.64
Foxc1Q61572 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Foxc1Q61572 Gm23903-201ENSMUST00000157566 131 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms