Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.63□□□□□ -1.83
Vsx2Q61412 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Vsx2Q61412 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Vsx2Q61412 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Vsx2Q61412 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC3.63□□□□□ -1.83
Vsx2Q61412 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Vsx2Q61412 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Vsx2Q61412 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Vsx2Q61412 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.63□□□□□ -1.83
Vsx2Q61412 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.63□□□□□ -1.83
Vsx2Q61412 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.63□□□□□ -1.83
Vsx2Q61412 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Vsx2Q61412 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Vsx2Q61412 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm11408-201ENSMUST00000117889 519 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm11923-201ENSMUST00000118135 508 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm6893-201ENSMUST00000118385 522 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm11600-201ENSMUST00000119592 240 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm22480-201ENSMUST00000122568 128 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm22219-201ENSMUST00000157562 319 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm24550-201ENSMUST00000158648 279 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm22531-201ENSMUST00000158819 140 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm27044-201ENSMUST00000183033 796 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Vsx2Q61412 Trbv28-201ENSMUST00000192804 264 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm37239-201ENSMUST00000193510 141 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm7041-201ENSMUST00000201227 524 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm44487-201ENSMUST00000205145 325 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm44871-201ENSMUST00000207821 497 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm6929-201ENSMUST00000210930 468 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm17989-201ENSMUST00000211543 412 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC3.62□□□□□ -1.83
Vsx2Q61412 AC073947.1-201ENSMUST00000216991 649 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Vsx2Q61412 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Gm3829-201ENSMUST00000222362 619 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.62□□□□□ -1.83
Vsx2Q61412 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Vsx2Q61412 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Vsx2Q61412 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.62□□□□□ -1.83
Vsx2Q61412 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Vsx2Q61412 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3.62□□□□□ -1.83
Vsx2Q61412 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Vsx2Q61412 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm26387-201ENSMUST00000104238 132 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm11406-201ENSMUST00000117418 484 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm4910-201ENSMUST00000119605 366 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm22730-201ENSMUST00000158085 171 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm17177-201ENSMUST00000169144 483 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Mir6907-201ENSMUST00000183764 71 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm8641-201ENSMUST00000186995 826 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.61□□□□□ -1.83
Vsx2Q61412 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm18445-201ENSMUST00000195502 774 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm36985-201ENSMUST00000195595 379 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Mir1892-201ENSMUST00000197752 80 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm42625-201ENSMUST00000198611 922 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm44869-201ENSMUST00000208836 357 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Vsx2Q61412 AC154510.1-201ENSMUST00000223925 737 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Olfr713-201ENSMUST00000098139 975 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Vsx2Q61412 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Vsx2Q61412 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Vsx2Q61412 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.61□□□□□ -1.83
Vsx2Q61412 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Vsx2Q61412 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vsx2Q61412 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Vsx2Q61412 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Vsx2Q61412 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Vsx2Q61412 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.6□□□□□ -1.83
Vsx2Q61412 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Vsx2Q61412 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms