Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm37418-201ENSMUST00000195031 274 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm19096-201ENSMUST00000209705 766 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm39197-201ENSMUST00000212069 457 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.74□□□□□ -1.65
CtcfQ61164 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 AC107663.3-201ENSMUST00000225873 601 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CtcfQ61164 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CtcfQ61164 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm23846-201ENSMUST00000083835 107 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CtcfQ61164 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.74□□□□□ -1.65
CtcfQ61164 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CtcfQ61164 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CtcfQ61164 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 Gm24117-201ENSMUST00000103973 133 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm11914-201ENSMUST00000117094 507 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm14878-201ENSMUST00000118167 293 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm15951-201ENSMUST00000118377 400 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm12090-201ENSMUST00000118692 758 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm12852-201ENSMUST00000119478 719 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm5379-201ENSMUST00000120973 826 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CtcfQ61164 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CtcfQ61164 Gm24532-201ENSMUST00000157951 286 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm17377-201ENSMUST00000165184 207 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 Gm28625-201ENSMUST00000188309 205 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm3933-201ENSMUST00000195391 439 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm37095-201ENSMUST00000195421 205 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 Gm42720-201ENSMUST00000196813 300 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm4734-201ENSMUST00000200117 777 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm33626-201ENSMUST00000206790 828 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.73□□□□□ -1.65
CtcfQ61164 AC164297.5-201ENSMUST00000224365 198 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 AC147628.1-201ENSMUST00000228193 688 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CtcfQ61164 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CtcfQ61164 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CtcfQ61164 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CtcfQ61164 Gm6462-201ENSMUST00000081488 304 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 Gm23510-201ENSMUST00000083083 163 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CtcfQ61164 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 AC169038.1-201ENSMUST00000227378 1352 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CtcfQ61164 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CtcfQ61164 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.73□□□□□ -1.65
CtcfQ61164 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CtcfQ61164 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CtcfQ61164 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm24715-201ENSMUST00000102377 95 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm15030-201ENSMUST00000119804 484 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm11407-201ENSMUST00000120362 1058 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm13149-201ENSMUST00000122071 339 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm15367-201ENSMUST00000122398 1016 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm22968-201ENSMUST00000157955 118 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms