Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm5649-201ENSMUST00000217918 951 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Ccdc88aQ5SNZ0 Neat1-201ENSMUST00000173672 20771 ntBASIC4.21□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm14649-201ENSMUST00000121814 324 ntBASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm23855-201ENSMUST00000158377 135 ntBASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm2710-201ENSMUST00000073196 603 ntBASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm24817-201ENSMUST00000093672 105 ntBASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc88aQ5SNZ0 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm22023-201ENSMUST00000104354 130 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm5943-201ENSMUST00000119458 459 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm15466-201ENSMUST00000122299 333 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm5983-201ENSMUST00000197739 770 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm45157-201ENSMUST00000208729 401 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm45344-201ENSMUST00000211610 341 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Snord15a-201ENSMUST00000083888 148 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm22322-201ENSMUST00000157151 111 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm18900-201ENSMUST00000193218 584 ntBASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.2□□□□□ -1.74
Ccdc88aQ5SNZ0 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm12677-201ENSMUST00000118668 426 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm16005-201ENSMUST00000120515 269 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm13865-201ENSMUST00000120957 865 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm27592-201ENSMUST00000157729 126 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm25519-201ENSMUST00000158392 127 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm22174-201ENSMUST00000175050 125 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm22692-201ENSMUST00000175055 125 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm27634-201ENSMUST00000175060 126 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm26460-201ENSMUST00000175061 126 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm23162-201ENSMUST00000175081 121 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm22460-201ENSMUST00000175269 124 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm24365-201ENSMUST00000175384 125 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm44310-201ENSMUST00000175424 126 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm27903-201ENSMUST00000175482 126 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm22639-201ENSMUST00000175591 125 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm24979-201ENSMUST00000178626 126 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm27743-201ENSMUST00000185136 126 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm43308-201ENSMUST00000197236 373 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Snord35b-201ENSMUST00000082833 87 ntBASIC4.19□□□□□ -1.74
Ccdc88aQ5SNZ0 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm12902-201ENSMUST00000118389 322 ntBASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm14534-201ENSMUST00000120045 357 ntBASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms