Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm23455-201ENSMUST00000083331 100 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Mir325-201ENSMUST00000083491 98 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Mir342-201ENSMUST00000083502 99 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm25004-201ENSMUST00000083811 161 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm22473-201ENSMUST00000104114 132 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm24160-201ENSMUST00000104594 126 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm23879-201ENSMUST00000116874 126 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm24840-201ENSMUST00000122603 147 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm16327-201ENSMUST00000137146 228 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm11281-201ENSMUST00000141391 576 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm17109-201ENSMUST00000163985 358 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm9587-201ENSMUST00000172449 454 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm22177-201ENSMUST00000175002 158 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm18397-201ENSMUST00000176704 587 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm27033-201ENSMUST00000183226 544 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Mir6911-201ENSMUST00000184241 69 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm27690-201ENSMUST00000184596 126 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm27286-201ENSMUST00000184934 179 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm9687-201ENSMUST00000189312 602 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm38088-201ENSMUST00000195829 241 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm43649-201ENSMUST00000196596 391 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Mir7682-201ENSMUST00000198467 58 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm19096-201ENSMUST00000209705 766 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm19232-201ENSMUST00000211621 652 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm2607-201ENSMUST00000212389 627 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 AC154592.1-201ENSMUST00000225784 574 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.84□□□□□ -1.79
Trim40Q3UWA4 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.84□□□□□ -1.8
Trim40Q3UWA4 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
Trim40Q3UWA4 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.84□□□□□ -1.8
Trim40Q3UWA4 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Trim40Q3UWA4 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
Trim40Q3UWA4 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm26387-201ENSMUST00000104238 132 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm13550-201ENSMUST00000118185 525 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm13419-201ENSMUST00000121711 271 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm13131-201ENSMUST00000122228 321 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm26310-201ENSMUST00000157766 117 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm26915-201ENSMUST00000183080 748 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm28503-201ENSMUST00000185966 147 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm28745-201ENSMUST00000190069 305 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm44349-201ENSMUST00000197048 123 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm42850-201ENSMUST00000202094 201 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms