Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Mir147-201ENSMUST00000102354 79 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm23697-201ENSMUST00000103897 110 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm5943-201ENSMUST00000119458 459 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm12757-201ENSMUST00000119465 800 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm13852-201ENSMUST00000122350 242 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm25553-201ENSMUST00000158076 79 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm24002-201ENSMUST00000158456 104 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm19269-201ENSMUST00000211401 804 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm26203-201ENSMUST00000082911 114 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Mir30e-201ENSMUST00000083475 92 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trafd1Q3UDK1 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm25420-201ENSMUST00000104216 127 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm15151-201ENSMUST00000117106 177 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm11923-201ENSMUST00000118135 508 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm11566-201ENSMUST00000118550 203 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm12577-201ENSMUST00000119701 574 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm15019-201ENSMUST00000120148 434 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm14589-201ENSMUST00000121640 727 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm22988-201ENSMUST00000122759 144 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm24976-201ENSMUST00000158972 135 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm17159-201ENSMUST00000169043 482 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm22111-201ENSMUST00000178010 79 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm23687-201ENSMUST00000178664 79 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm24566-201ENSMUST00000179286 79 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm23305-201ENSMUST00000179342 79 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm23816-201ENSMUST00000179617 132 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm26389-201ENSMUST00000179819 79 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm22130-201ENSMUST00000179979 79 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm22393-201ENSMUST00000180153 79 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm25085-201ENSMUST00000180298 79 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm26556-201ENSMUST00000180645 320 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm19774-201ENSMUST00000190667 114 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm44972-201ENSMUST00000206419 406 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm4501-201ENSMUST00000207330 551 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm4558-201ENSMUST00000207886 521 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm45474-201ENSMUST00000209471 408 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 BC023105-201ENSMUST00000073997 1227 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Snord14e-201ENSMUST00000082857 90 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm10794-201ENSMUST00000099624 207 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trafd1Q3UDK1 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 Gm13268-201ENSMUST00000117485 433 ntBASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 Gm12392-201ENSMUST00000118014 938 ntBASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 Gm2288-201ENSMUST00000118560 638 ntBASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 Gm15364-201ENSMUST00000119618 585 ntBASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 Gm8757-201ENSMUST00000119660 372 ntBASIC3.86□□□□□ -1.79
Trafd1Q3UDK1 Gm6584-201ENSMUST00000119671 447 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 140.1 ms