Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm42481-201ENSMUST00000196822 2178 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm44446-201ENSMUST00000204864 255 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col9a1Q05722 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm46190-201ENSMUST00000219650 427 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 AC126440.1-201ENSMUST00000227098 349 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm6104-201ENSMUST00000078030 603 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm25204-201ENSMUST00000082843 106 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col9a1Q05722 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm22345-201ENSMUST00000122644 107 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm22257-201ENSMUST00000158687 301 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm8242-202ENSMUST00000193056 475 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm43407-201ENSMUST00000199816 317 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.28□□□□□ -1.4
Col9a1Q05722 AC188459.1-201ENSMUST00000216651 300 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm9237-201ENSMUST00000221499 548 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 AC183096.1-201ENSMUST00000226392 130 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 AC113031.3-201ENSMUST00000226552 190 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm28392-201ENSMUST00000077630 393 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Col9a1Q05722 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 AC158986.1-201ENSMUST00000228391 3455 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 AC123705.2-201ENSMUST00000221653 2009 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Dgkh-204ENSMUST00000227767 3319 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col9a1Q05722 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.28□□□□□ -1.4
Col9a1Q05722 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm10033-201ENSMUST00000072427 1813 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm24578-201ENSMUST00000103970 129 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm16128-201ENSMUST00000117855 626 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm14037-201ENSMUST00000120576 313 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm13424-201ENSMUST00000122301 354 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm22026-201ENSMUST00000122735 281 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm23740-201ENSMUST00000157385 100 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm22328-201ENSMUST00000158074 112 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm23891-201ENSMUST00000158114 138 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Mir1946a-201ENSMUST00000158360 134 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm24168-201ENSMUST00000178825 107 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm27834-201ENSMUST00000183427 125 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm9134-201ENSMUST00000193186 551 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm43441-201ENSMUST00000201458 205 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC6.27□□□□□ -1.41
Col9a1Q05722 AC122397.2-201ENSMUST00000227422 686 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms