Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm24764-201ENSMUST00000083686 199 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC4.65□□□□□ -1.67
Col8a1Q00780 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm45413-201ENSMUST00000210389 3538 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm43490-201ENSMUST00000197593 2652 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col8a1Q00780 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col8a1Q00780 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col8a1Q00780 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col8a1Q00780 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm14912-201ENSMUST00000120166 1773 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm19084-201ENSMUST00000222939 1762 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm24429-201ENSMUST00000104076 132 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm12646-201ENSMUST00000119144 238 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm14534-201ENSMUST00000120045 357 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.64□□□□□ -1.67
Col8a1Q00780 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm27660-201ENSMUST00000184028 208 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Mir6933-201ENSMUST00000184982 81 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm38008-201ENSMUST00000195333 518 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm44655-201ENSMUST00000207768 423 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.64□□□□□ -1.67
Col8a1Q00780 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm18696-201ENSMUST00000220103 274 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm23096-201ENSMUST00000083447 107 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 CT025686.2-201ENSMUST00000227898 3315 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 AC163731.1-201ENSMUST00000225696 3118 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col8a1Q00780 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col8a1Q00780 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col8a1Q00780 Gm6818-201ENSMUST00000190556 2558 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC4.63□□□□□ -1.67
Col8a1Q00780 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm25563-201ENSMUST00000104603 74 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm14681-201ENSMUST00000118047 411 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm16106-201ENSMUST00000119187 294 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm12935-201ENSMUST00000119352 246 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm12466-201ENSMUST00000121199 620 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm4852-201ENSMUST00000121202 729 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm13356-201ENSMUST00000121678 335 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms