Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.13□□□□□ -1.59
SgcbP82349 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SgcbP82349 Gm24689-201ENSMUST00000157760 104 ntBASIC5.13□□□□□ -1.59
SgcbP82349 Mir7211-201ENSMUST00000184071 63 ntBASIC5.13□□□□□ -1.59
SgcbP82349 Gm19193-201ENSMUST00000190263 590 ntBASIC5.13□□□□□ -1.59
SgcbP82349 Gm37817-201ENSMUST00000195276 434 ntBASIC5.13□□□□□ -1.59
SgcbP82349 Gm43779-201ENSMUST00000196691 829 ntBASIC5.13□□□□□ -1.59
SgcbP82349 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SgcbP82349 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.13□□□□□ -1.59
SgcbP82349 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.13□□□□□ -1.59
SgcbP82349 Gm44765-201ENSMUST00000206927 601 ntBASIC5.13□□□□□ -1.59
SgcbP82349 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.13□□□□□ -1.59
SgcbP82349 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.13□□□□□ -1.59
SgcbP82349 Gm46223-201ENSMUST00000215196 675 ntBASIC5.13□□□□□ -1.59
SgcbP82349 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SgcbP82349 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.13□□□□□ -1.59
SgcbP82349 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.13□□□□□ -1.59
SgcbP82349 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.13□□□□□ -1.59
SgcbP82349 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.13□□□□□ -1.59
SgcbP82349 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SgcbP82349 Mir143-201ENSMUST00000083511 63 ntBASIC5.13□□□□□ -1.59
SgcbP82349 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SgcbP82349 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.13□□□□□ -1.59
SgcbP82349 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SgcbP82349 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SgcbP82349 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SgcbP82349 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcbP82349 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SgcbP82349 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.13□□□□□ -1.59
SgcbP82349 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcbP82349 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.13□□□□□ -1.59
SgcbP82349 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SgcbP82349 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SgcbP82349 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.12□□□□□ -1.59
SgcbP82349 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
SgcbP82349 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SgcbP82349 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Gm12245-201ENSMUST00000117266 357 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Gm5757-201ENSMUST00000117494 528 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Gm14566-201ENSMUST00000118915 321 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC5.12□□□□□ -1.59
SgcbP82349 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Gm26169-201ENSMUST00000158420 135 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Gm24860-201ENSMUST00000158457 276 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.12□□□□□ -1.59
SgcbP82349 Gm18199-201ENSMUST00000173820 835 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Mir5099-201ENSMUST00000175257 74 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Gm20657-201ENSMUST00000177079 515 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Mir6971-201ENSMUST00000183497 63 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Gm27402-201ENSMUST00000183890 120 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.12□□□□□ -1.59
SgcbP82349 Gm9443-201ENSMUST00000188406 816 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Gm28717-201ENSMUST00000189950 315 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Gm38131-201ENSMUST00000192449 430 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.12□□□□□ -1.59
SgcbP82349 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.12□□□□□ -1.59
SgcbP82349 Gm43914-201ENSMUST00000203592 594 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC5.12□□□□□ -1.59
SgcbP82349 Gm44817-201ENSMUST00000205416 453 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Gm9685-201ENSMUST00000211275 538 ntBASIC5.12□□□□□ -1.59
SgcbP82349 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.12□□□□□ -1.59
SgcbP82349 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.12□□□□□ -1.59
SgcbP82349 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.12□□□□□ -1.59
SgcbP82349 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Gm17165-201ENSMUST00000096155 493 ntBASIC5.12□□□□□ -1.59
SgcbP82349 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SgcbP82349 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SgcbP82349 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SgcbP82349 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
SgcbP82349 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SgcbP82349 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SgcbP82349 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SgcbP82349 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SgcbP82349 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SgcbP82349 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SgcbP82349 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SgcbP82349 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SgcbP82349 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
SgcbP82349 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SgcbP82349 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SgcbP82349 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.11□□□□□ -1.59
SgcbP82349 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.11□□□□□ -1.59
SgcbP82349 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms