Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.1□□□□□ -1.59
Shmt1P50431 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Shmt1P50431 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.09□□□□□ -1.59
Shmt1P50431 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.09□□□□□ -1.59
Shmt1P50431 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Shmt1P50431 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Shmt1P50431 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Shmt1P50431 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Shmt1P50431 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Shmt1P50431 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm19074-201ENSMUST00000218915 1429 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Shmt1P50431 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm24124-201ENSMUST00000104103 132 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm11631-201ENSMUST00000119220 156 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm6587-201ENSMUST00000120219 613 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm16428-201ENSMUST00000121193 723 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Shmt1P50431 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm18522-201ENSMUST00000173947 650 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm24315-201ENSMUST00000177835 127 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC5.09□□□□□ -1.59
Shmt1P50431 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm8458-201ENSMUST00000196658 819 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm43472-201ENSMUST00000200175 154 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm18100-201ENSMUST00000200897 452 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm17991-201ENSMUST00000208139 297 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm45157-201ENSMUST00000208729 401 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Shmt1P50431 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm46234-201ENSMUST00000218702 259 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm8681-201ENSMUST00000219115 618 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 AC131720.2-201ENSMUST00000220420 431 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Shmt1P50431 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Shmt1P50431 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Shmt1P50431 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm22350-201ENSMUST00000083924 156 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Shmt1P50431 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.09□□□□□ -1.59
Shmt1P50431 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Shmt1P50431 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Shmt1P50431 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Shmt1P50431 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Gm336-201ENSMUST00000186376 1480 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Shmt1P50431 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Shmt1P50431 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm13491-201ENSMUST00000118267 235 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Gm12820-201ENSMUST00000119233 342 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Gm15493-201ENSMUST00000119461 528 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Gm14785-201ENSMUST00000120185 539 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Gm11522-201ENSMUST00000120533 176 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm26034-201ENSMUST00000158154 116 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Mir1947-201ENSMUST00000158235 85 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Gm24734-201ENSMUST00000158860 262 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm5558-201ENSMUST00000178933 495 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm27905-201ENSMUST00000184005 207 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.08□□□□□ -1.6
Shmt1P50431 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Gm18482-201ENSMUST00000202405 760 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 AC069561.3-201ENSMUST00000217321 114 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Shmt1P50431 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm8724-201ENSMUST00000081668 483 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Mir27a-201ENSMUST00000083510 87 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms