Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm18186-201ENSMUST00000192239 1580 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Rfx1P48377 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm22372-201ENSMUST00000104589 136 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Gm12515-201ENSMUST00000120116 361 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Gm9498-201ENSMUST00000140849 291 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Gm24687-201ENSMUST00000157758 241 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Gm25555-201ENSMUST00000158078 111 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Gm23896-201ENSMUST00000158109 130 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Gm24343-201ENSMUST00000158708 111 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC6.27□□□□□ -1.41
Rfx1P48377 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm38075-201ENSMUST00000191979 920 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm8747-201ENSMUST00000195392 751 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Igkv15-97-201ENSMUST00000197637 339 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Gm2040-201ENSMUST00000202979 289 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Rfx1P48377 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Rfx1P48377 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm29884-201ENSMUST00000218403 453 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Gm31849-201ENSMUST00000220306 375 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Gm3800-201ENSMUST00000221086 554 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Rfx1P48377 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 AC125399.1-201ENSMUST00000224236 595 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 AC154576.1-201ENSMUST00000225864 563 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 AC100733.1-201ENSMUST00000228494 407 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Rfx1P48377 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Rfx1P48377 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm25475-201ENSMUST00000082825 180 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Gm23345-201ENSMUST00000083817 150 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Rfx1P48377 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Rfx1P48377 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.27□□□□□ -1.41
Rfx1P48377 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Rfx1P48377 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Rfx1P48377 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Rfx1P48377 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Rfx1P48377 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Rfx1P48377 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Rfx1P48377 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
Rfx1P48377 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Rfx1P48377 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Rfx1P48377 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Rfx1P48377 Zscan4a-201ENSMUST00000210573 2279 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm23744-201ENSMUST00000104231 149 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm23593-201ENSMUST00000104309 120 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm14678-201ENSMUST00000121396 482 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm22208-201ENSMUST00000122658 110 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC6.26□□□□□ -1.41
Rfx1P48377 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.26□□□□□ -1.41
Rfx1P48377 Gm23354-201ENSMUST00000158426 104 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm26092-201ENSMUST00000179798 97 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm21171-201ENSMUST00000180048 673 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Mir669a-1-201ENSMUST00000180238 97 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm27028-201ENSMUST00000182303 399 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm28016-201ENSMUST00000184594 196 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm29031-201ENSMUST00000185316 614 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm29000-201ENSMUST00000185444 614 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm28204-201ENSMUST00000185934 614 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm28290-201ENSMUST00000186505 614 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm28161-201ENSMUST00000186669 614 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm6693-201ENSMUST00000189583 813 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm28749-209ENSMUST00000189599 614 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm37889-201ENSMUST00000194174 251 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm33163-201ENSMUST00000194504 614 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm44360-201ENSMUST00000200081 82 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Rfx1P48377 Gm45367-201ENSMUST00000210171 347 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.26□□□□□ -1.41
Rfx1P48377 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC6.26□□□□□ -1.41
Rfx1P48377 Gm17999-201ENSMUST00000211568 542 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC6.26□□□□□ -1.41
Rfx1P48377 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC6.26□□□□□ -1.41
Rfx1P48377 AC154640.2-201ENSMUST00000226324 472 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 AC133076.1-201ENSMUST00000228074 484 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm10038-201ENSMUST00000077233 441 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Rfx1P48377 Olfr519-201ENSMUST00000084752 960 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Gm3867-201ENSMUST00000086108 279 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
Rfx1P48377 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Rfx1P48377 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Rfx1P48377 Gm2099-202ENSMUST00000223310 3341 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 AC123858.1-201ENSMUST00000226948 1874 ntBASIC6.26□□□□□ -1.41
Rfx1P48377 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms