Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm37470-201ENSMUST00000193378 2798 ntBASIC3.35□□□□□ -1.87
Tnfsf4P43488 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.35□□□□□ -1.87
Tnfsf4P43488 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf4P43488 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Tnfsf4P43488 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf4P43488 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.35□□□□□ -1.87
Tnfsf4P43488 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Tnfsf4P43488 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm23273-201ENSMUST00000104058 135 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm11510-201ENSMUST00000120278 347 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm12884-201ENSMUST00000120371 325 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm11260-201ENSMUST00000121163 942 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm22588-201ENSMUST00000157510 140 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm23112-201ENSMUST00000158606 125 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm22501-201ENSMUST00000158981 127 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm23775-201ENSMUST00000158991 249 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm28030-201ENSMUST00000184987 138 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm29408-201ENSMUST00000187536 216 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm17951-201ENSMUST00000198536 496 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Tnfsf4P43488 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.34□□□□□ -1.87
Tnfsf4P43488 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Tnfsf4P43488 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.34□□□□□ -1.88
Tnfsf4P43488 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Tnfsf4P43488 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Tnfsf4P43488 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Tnfsf4P43488 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Tnfsf4P43488 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm13167-201ENSMUST00000118554 578 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm12387-201ENSMUST00000118573 955 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm14119-201ENSMUST00000119511 235 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm5924-201ENSMUST00000132554 871 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm10357-201ENSMUST00000159886 264 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Mir6914-201ENSMUST00000184999 69 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm37239-201ENSMUST00000193510 141 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm38332-201ENSMUST00000194189 147 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm21112-201ENSMUST00000212224 578 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm7760-201ENSMUST00000212265 578 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm10704-201ENSMUST00000098952 730 ntBASIC3.33□□□□□ -1.88
Tnfsf4P43488 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Tnfsf4P43488 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Tnfsf4P43488 Gm24855-201ENSMUST00000104848 97 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Gm12125-201ENSMUST00000117261 736 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Gm12722-201ENSMUST00000118507 493 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Gm11913-201ENSMUST00000119094 336 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Gm5963-201ENSMUST00000143451 236 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Tnfsf4P43488 Gm23666-201ENSMUST00000158053 116 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Tnfsf4P43488 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Mir7031-201ENSMUST00000183860 65 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Gm18486-201ENSMUST00000184040 298 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Gm28967-201ENSMUST00000187351 281 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Trbv28-201ENSMUST00000192804 264 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Gm37617-201ENSMUST00000194309 159 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Gm43084-201ENSMUST00000200696 947 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.32□□□□□ -1.88
Tnfsf4P43488 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms