Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm21572-201ENSMUST00000180134 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21529-201ENSMUST00000180175 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm29370-202ENSMUST00000187476 499 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm42621-201ENSMUST00000198114 275 ntBASIC3.66□□□□□ -1.82
HttP42859 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HttP42859 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HttP42859 AC131687.1-201ENSMUST00000225931 5446 ntBASIC3.66□□□□□ -1.82
HttP42859 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HttP42859 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HttP42859 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HttP42859 Gm15733-201ENSMUST00000132957 242 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm24059-201ENSMUST00000157493 312 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm20239-201ENSMUST00000196610 982 ntBASIC3.66□□□□□ -1.82
HttP42859 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HttP42859 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.66□□□□□ -1.82
HttP42859 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.65□□□□□ -1.82
HttP42859 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
HttP42859 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HttP42859 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HttP42859 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HttP42859 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HttP42859 Gm24067-201ENSMUST00000104514 85 ntBASIC3.65□□□□□ -1.82
HttP42859 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HttP42859 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HttP42859 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
HttP42859 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HttP42859 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
HttP42859 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
HttP42859 Gm43594-201ENSMUST00000201153 3442 ntBASIC3.65□□□□□ -1.82
HttP42859 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.65□□□□□ -1.82
HttP42859 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HttP42859 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
HttP42859 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
HttP42859 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
HttP42859 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HttP42859 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HttP42859 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HttP42859 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HttP42859 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
HttP42859 Gm8260-201ENSMUST00000119230 353 ntBASIC3.65□□□□□ -1.83
HttP42859 Gm23230-201ENSMUST00000157298 133 ntBASIC3.65□□□□□ -1.83
HttP42859 Gm22849-201ENSMUST00000157713 307 ntBASIC3.65□□□□□ -1.83
HttP42859 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HttP42859 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HttP42859 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HttP42859 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HttP42859 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HttP42859 Gm11363-201ENSMUST00000121672 548 ntBASIC3.64□□□□□ -1.83
HttP42859 Gm23791-201ENSMUST00000122553 293 ntBASIC3.64□□□□□ -1.83
HttP42859 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.64□□□□□ -1.83
HttP42859 Gm44688-201ENSMUST00000209083 537 ntBASIC3.64□□□□□ -1.83
HttP42859 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HttP42859 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HttP42859 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC3.64□□□□□ -1.83
HttP42859 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HttP42859 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HttP42859 Mir291a-201ENSMUST00000104815 82 ntBASIC3.64□□□□□ -1.83
HttP42859 Gm6947-201ENSMUST00000186254 78 ntBASIC3.64□□□□□ -1.83
HttP42859 Stk-ps2-204ENSMUST00000187808 616 ntBASIC3.64□□□□□ -1.83
HttP42859 Gm37698-201ENSMUST00000192605 463 ntBASIC3.64□□□□□ -1.83
HttP42859 Gm37575-201ENSMUST00000195467 309 ntBASIC3.64□□□□□ -1.83
HttP42859 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HttP42859 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HttP42859 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.64□□□□□ -1.83
HttP42859 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HttP42859 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.64□□□□□ -1.83
HttP42859 Gm37781-201ENSMUST00000194773 3218 ntBASIC3.64□□□□□ -1.83
HttP42859 Gm11262-201ENSMUST00000119326 833 ntBASIC3.64□□□□□ -1.83
HttP42859 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HttP42859 Gm22187-201ENSMUST00000157819 129 ntBASIC3.64□□□□□ -1.83
HttP42859 Gm23775-201ENSMUST00000158991 249 ntBASIC3.64□□□□□ -1.83
HttP42859 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.64□□□□□ -1.83
HttP42859 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.64□□□□□ -1.83
HttP42859 Gm44519-201ENSMUST00000206486 122 ntBASIC3.64□□□□□ -1.83
HttP42859 Gm18363-201ENSMUST00000221671 730 ntBASIC3.64□□□□□ -1.83
HttP42859 AC163621.2-201ENSMUST00000222229 682 ntBASIC3.64□□□□□ -1.83
HttP42859 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.63□□□□□ -1.83
HttP42859 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HttP42859 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HttP42859 Gm22383-201ENSMUST00000158188 327 ntBASIC3.63□□□□□ -1.83
HttP42859 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.63□□□□□ -1.83
HttP42859 Gm23963-201ENSMUST00000179603 77 ntBASIC3.63□□□□□ -1.83
HttP42859 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HttP42859 Gm25820-201ENSMUST00000198589 127 ntBASIC3.63□□□□□ -1.83
HttP42859 Gm6842-201ENSMUST00000211361 390 ntBASIC3.63□□□□□ -1.83
HttP42859 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HttP42859 Gm22551-201ENSMUST00000157795 103 ntBASIC3.63□□□□□ -1.83
HttP42859 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.63□□□□□ -1.83
HttP42859 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.63□□□□□ -1.83
HttP42859 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.63□□□□□ -1.83
HttP42859 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.63□□□□□ -1.83
HttP42859 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.63□□□□□ -1.83
HttP42859 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.63□□□□□ -1.83
HttP42859 Gm43368-201ENSMUST00000200638 409 ntBASIC3.63□□□□□ -1.83
HttP42859 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HttP42859 CT030662.2-201ENSMUST00000226942 805 ntBASIC3.63□□□□□ -1.83
HttP42859 Olfr1153-201ENSMUST00000052300 957 ntBASIC3.63□□□□□ -1.83
HttP42859 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
HttP42859 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms