Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.9□□□□□ -1.63
LdlrP35951 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.9□□□□□ -1.63
LdlrP35951 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LdlrP35951 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.9□□□□□ -1.63
LdlrP35951 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LdlrP35951 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LdlrP35951 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LdlrP35951 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LdlrP35951 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 Gm24430-201ENSMUST00000104077 104 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm15076-201ENSMUST00000117076 474 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm15175-201ENSMUST00000117629 132 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm11346-201ENSMUST00000118346 704 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 Gm25434-201ENSMUST00000158278 167 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
LdlrP35951 Cfap61-214ENSMUST00000167179 183 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm22852-201ENSMUST00000177899 101 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LdlrP35951 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.89□□□□□ -1.63
LdlrP35951 Gm27313-201ENSMUST00000183500 142 ntBASIC4.89□□□□□ -1.63
LdlrP35951 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.89□□□□□ -1.63
LdlrP35951 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 Gm28843-201ENSMUST00000189198 678 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm29546-201ENSMUST00000191171 678 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm9134-201ENSMUST00000193186 551 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm42805-201ENSMUST00000196158 276 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm8458-201ENSMUST00000196658 819 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm42924-201ENSMUST00000197261 185 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm44465-201ENSMUST00000199536 114 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm44431-201ENSMUST00000203500 413 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm45427-201ENSMUST00000209572 1253 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Gm2607-201ENSMUST00000212389 627 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC4.89□□□□□ -1.63
LdlrP35951 AC138667.2-201ENSMUST00000224880 598 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LdlrP35951 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LdlrP35951 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.89□□□□□ -1.63
LdlrP35951 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LdlrP35951 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LdlrP35951 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LdlrP35951 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LdlrP35951 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LdlrP35951 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LdlrP35951 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LdlrP35951 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LdlrP35951 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LdlrP35951 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LdlrP35951 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LdlrP35951 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
LdlrP35951 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LdlrP35951 Gm13321-201ENSMUST00000117101 400 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm3267-201ENSMUST00000118671 473 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm12448-201ENSMUST00000118852 655 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm11196-201ENSMUST00000119052 395 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm12880-201ENSMUST00000120652 494 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm12607-201ENSMUST00000120724 493 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm12900-201ENSMUST00000120919 573 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm22726-201ENSMUST00000158089 179 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm25865-201ENSMUST00000158247 104 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm24875-201ENSMUST00000158888 104 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LdlrP35951 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
LdlrP35951 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm27551-201ENSMUST00000184258 77 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
LdlrP35951 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LdlrP35951 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.88□□□□□ -1.63
LdlrP35951 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm42459-201ENSMUST00000199679 742 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.88□□□□□ -1.63
LdlrP35951 Gm32536-201ENSMUST00000205209 445 ntBASIC4.88□□□□□ -1.63
LdlrP35951 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.88□□□□□ -1.63
LdlrP35951 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm8681-201ENSMUST00000219115 618 ntBASIC4.88□□□□□ -1.63
LdlrP35951 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LdlrP35951 Gm4263-202ENSMUST00000221392 667 ntBASIC4.88□□□□□ -1.63
LdlrP35951 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 123.3 ms