Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col3a1P08121 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col3a1P08121 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col3a1P08121 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col3a1P08121 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.65□□□□□ -1.66
Col3a1P08121 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col3a1P08121 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm25272-201ENSMUST00000104293 128 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm23322-201ENSMUST00000104464 167 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm13731-201ENSMUST00000117332 196 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm15926-201ENSMUST00000120492 550 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm28010-201ENSMUST00000179485 126 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm26556-201ENSMUST00000180645 320 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm28263-201ENSMUST00000185884 400 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.65□□□□□ -1.66
Col3a1P08121 Gm29334-201ENSMUST00000190334 357 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm19066-201ENSMUST00000193232 1078 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm44395-201ENSMUST00000197056 153 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.65□□□□□ -1.66
Col3a1P08121 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 AC069561.2-201ENSMUST00000217596 420 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm9472-201ENSMUST00000221625 526 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 AC158536.1-201ENSMUST00000222510 256 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Gm12582-201ENSMUST00000030555 697 ntBASIC4.65□□□□□ -1.66
Col3a1P08121 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col3a1P08121 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col3a1P08121 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col3a1P08121 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col3a1P08121 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col3a1P08121 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col3a1P08121 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col3a1P08121 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col3a1P08121 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col3a1P08121 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Col3a1P08121 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col3a1P08121 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col3a1P08121 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.65□□□□□ -1.67
Col3a1P08121 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col3a1P08121 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col3a1P08121 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col3a1P08121 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col3a1P08121 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Col3a1P08121 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col3a1P08121 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col3a1P08121 Gm11600-201ENSMUST00000119592 240 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Gm9043-201ENSMUST00000119677 314 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Gm25105-201ENSMUST00000122477 130 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.64□□□□□ -1.67
Col3a1P08121 Gm25667-201ENSMUST00000157701 275 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col3a1P08121 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col3a1P08121 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Col3a1P08121 Gm28060-201ENSMUST00000191554 189 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Gm38214-201ENSMUST00000192581 988 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Gm37993-201ENSMUST00000195301 988 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col3a1P08121 Gm43276-201ENSMUST00000199712 364 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Gm18193-201ENSMUST00000210017 772 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Gm8748-201ENSMUST00000211125 587 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col3a1P08121 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col3a1P08121 Gm24147-201ENSMUST00000082763 144 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col3a1P08121 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.64□□□□□ -1.67
Col3a1P08121 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col3a1P08121 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col3a1P08121 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col3a1P08121 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col3a1P08121 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col3a1P08121 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.64□□□□□ -1.67
Col3a1P08121 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col3a1P08121 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Col3a1P08121 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col3a1P08121 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col3a1P08121 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col3a1P08121 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Col3a1P08121 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col3a1P08121 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC4.63□□□□□ -1.67
Col3a1P08121 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 Gm13831-201ENSMUST00000118764 302 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 Gm13118-201ENSMUST00000120402 549 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Gm22480-201ENSMUST00000122568 128 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms