Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Hmgb3O54879 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm37655-201ENSMUST00000193968 4123 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm37176-201ENSMUST00000193300 4051 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Hmgb3O54879 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm37868-201ENSMUST00000195578 2735 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm26376-201ENSMUST00000104784 110 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm12982-201ENSMUST00000117408 190 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm15313-201ENSMUST00000119179 282 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm24550-201ENSMUST00000158648 279 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm6374-201ENSMUST00000159051 788 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm16490-201ENSMUST00000165299 351 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm20674-201ENSMUST00000177452 369 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm20574-201ENSMUST00000182867 917 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Mir7037-201ENSMUST00000184414 65 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm43601-201ENSMUST00000196294 945 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm43724-201ENSMUST00000197516 226 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm17780-201ENSMUST00000207142 612 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm18903-201ENSMUST00000215343 480 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC2.98□□□□□ -1.93
Hmgb3O54879 AV026068-224ENSMUST00000224827 928 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 AC167669.1-201ENSMUST00000224932 384 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Hmgb3O54879 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm38073-201ENSMUST00000195141 3665 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Hmgb3O54879 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Hmgb3O54879 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC2.98□□□□□ -1.93
Hmgb3O54879 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Hmgb3O54879 AC122840.2-201ENSMUST00000221030 2659 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm10811-201ENSMUST00000221985 2448 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Hmgb3O54879 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Hmgb3O54879 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm13733-201ENSMUST00000117290 535 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm14885-201ENSMUST00000117969 496 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm13122-201ENSMUST00000118380 453 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm11890-201ENSMUST00000119585 417 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm12900-201ENSMUST00000120919 573 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Hmgb3O54879 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm22036-201ENSMUST00000157279 215 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm22890-201ENSMUST00000158642 144 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm9890-201ENSMUST00000171867 537 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm10074-201ENSMUST00000174543 249 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm26933-201ENSMUST00000182320 827 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm3454-201ENSMUST00000185571 412 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm37575-201ENSMUST00000195467 309 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm45063-201ENSMUST00000203726 472 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Hmgb3O54879 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Hmgb3O54879 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm3829-201ENSMUST00000222362 619 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 LOC667541-201ENSMUST00000223408 278 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 AC154452.1-201ENSMUST00000225819 241 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 AC154626.1-201ENSMUST00000226070 311 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm25481-201ENSMUST00000083221 158 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Gm10212-201ENSMUST00000087884 324 ntBASIC2.97□□□□□ -1.93
Hmgb3O54879 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Hmgb3O54879 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm6982-201ENSMUST00000118752 1560 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Hmgb3O54879 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm23133-201ENSMUST00000104255 135 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms