Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.59□□□□□ -1.84
CtcflA2APF3 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.59□□□□□ -1.84
CtcflA2APF3 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.59□□□□□ -1.84
CtcflA2APF3 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CtcflA2APF3 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm24096-201ENSMUST00000103905 110 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm14750-201ENSMUST00000118262 516 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm25271-201ENSMUST00000157273 290 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm23583-201ENSMUST00000158533 289 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm16569-201ENSMUST00000160526 314 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm3851-201ENSMUST00000168653 318 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CtcflA2APF3 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CtcflA2APF3 Mir6398-201ENSMUST00000184541 102 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm27190-201ENSMUST00000184890 542 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CtcflA2APF3 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm37088-201ENSMUST00000193887 406 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm43710-201ENSMUST00000199583 452 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm4734-201ENSMUST00000200117 777 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm45072-201ENSMUST00000208673 929 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Gm10115-201ENSMUST00000076071 1228 ntBASIC3.58□□□□□ -1.84
CtcflA2APF3 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CtcflA2APF3 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CtcflA2APF3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CtcflA2APF3 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CtcflA2APF3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm25726-201ENSMUST00000104529 129 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm13733-201ENSMUST00000117290 535 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CtcflA2APF3 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CtcflA2APF3 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm23465-201ENSMUST00000157134 262 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm24224-201ENSMUST00000158828 258 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm17155-201ENSMUST00000165969 473 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm27896-201ENSMUST00000175162 317 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Mir5098-201ENSMUST00000175320 82 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Mir7031-201ENSMUST00000183860 65 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm29228-201ENSMUST00000185489 418 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm6802-202ENSMUST00000186566 126 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm37102-201ENSMUST00000195740 1105 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm5309-201ENSMUST00000197416 677 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm22897-201ENSMUST00000197860 128 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm44403-201ENSMUST00000198554 129 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm45078-201ENSMUST00000205343 546 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm45458-201ENSMUST00000209900 522 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm45690-201ENSMUST00000210775 246 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gm18320-201ENSMUST00000211304 595 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CtcflA2APF3 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 AC139294.2-201ENSMUST00000227159 285 ntBASIC3.57□□□□□ -1.84
CtcflA2APF3 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CtcflA2APF3 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
CtcflA2APF3 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms