Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Speer3W4VSP1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Speer3W4VSP1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Speer3W4VSP1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Speer3W4VSP1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Speer3W4VSP1 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.72■□□□□ 0.43
Speer3W4VSP1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Speer3W4VSP1 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.72■□□□□ 0.43
Speer3W4VSP1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Speer3W4VSP1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Speer3W4VSP1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Speer3W4VSP1 Gm6211-202ENSMUST00000167849 925 ntBASIC17.72■□□□□ 0.43
Speer3W4VSP1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.72■□□□□ 0.43
Speer3W4VSP1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Speer3W4VSP1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Speer3W4VSP1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Speer3W4VSP1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Speer3W4VSP1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Speer3W4VSP1 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.72■□□□□ 0.43
Speer3W4VSP1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Speer3W4VSP1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Speer3W4VSP1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.71■□□□□ 0.43
Speer3W4VSP1 Gm37179-201ENSMUST00000194862 823 ntBASIC17.71■□□□□ 0.43
Speer3W4VSP1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Speer3W4VSP1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Speer3W4VSP1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Speer3W4VSP1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Speer3W4VSP1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Speer3W4VSP1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Gm12933-201ENSMUST00000120203 872 ntBASIC17.7■□□□□ 0.42
Speer3W4VSP1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.7■□□□□ 0.42
Speer3W4VSP1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Gm10602-201ENSMUST00000098239 609 ntBASIC17.7■□□□□ 0.42
Speer3W4VSP1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Speer3W4VSP1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Speer3W4VSP1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.69■□□□□ 0.42
Speer3W4VSP1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Speer3W4VSP1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Speer3W4VSP1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Speer3W4VSP1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Speer3W4VSP1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Speer3W4VSP1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Speer3W4VSP1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Speer3W4VSP1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Speer3W4VSP1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Speer3W4VSP1 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.68■□□□□ 0.42
Speer3W4VSP1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Speer3W4VSP1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.67■□□□□ 0.42
Speer3W4VSP1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Speer3W4VSP1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Speer3W4VSP1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Speer3W4VSP1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Speer3W4VSP1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.67■□□□□ 0.42
Speer3W4VSP1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Speer3W4VSP1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms