Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Gm7291-201ENSMUST00000199147 382 ntBASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb1S4R1E0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Gm6211-202ENSMUST00000167849 925 ntBASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Idnk-204ENSMUST00000226010 1898 ntBASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb1S4R1E0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb1S4R1E0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb1S4R1E0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb1S4R1E0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb1S4R1E0 Gm10849-201ENSMUST00000100397 618 ntBASIC15.77■□□□□ 0.12
H2afb1S4R1E0 Gm2399-201ENSMUST00000104944 225 ntBASIC15.77■□□□□ 0.12
H2afb1S4R1E0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb1S4R1E0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb1S4R1E0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb1S4R1E0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb1S4R1E0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
H2afb1S4R1E0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
H2afb1S4R1E0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms