Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm7370-201ENSMUST00000219471 767 ntBASIC18.07■□□□□ 0.48
Smarcb1Q9Z0H3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Smarcb1Q9Z0H3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcb1Q9Z0H3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcb1Q9Z0H3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcb1Q9Z0H3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.07■□□□□ 0.48
Smarcb1Q9Z0H3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcb1Q9Z0H3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Gm23634-201ENSMUST00000175071 91 ntBASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcb1Q9Z0H3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcb1Q9Z0H3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Gm27389-201ENSMUST00000183622 195 ntBASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcb1Q9Z0H3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 AA414768-201ENSMUST00000121924 1257 ntBASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcb1Q9Z0H3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcb1Q9Z0H3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.02■□□□□ 0.47
Smarcb1Q9Z0H3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Gm25016-201ENSMUST00000158399 131 ntBASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.01■□□□□ 0.47
Smarcb1Q9Z0H3 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms