Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scn8aQ9WTU3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.55■□□□□ 0.4
Scn8aQ9WTU3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn8aQ9WTU3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn8aQ9WTU3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn8aQ9WTU3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scn8aQ9WTU3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn8aQ9WTU3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn8aQ9WTU3 Gm18101-201ENSMUST00000215769 548 ntBASIC17.55■□□□□ 0.4
Scn8aQ9WTU3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn8aQ9WTU3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn8aQ9WTU3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Scn8aQ9WTU3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn8aQ9WTU3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn8aQ9WTU3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn8aQ9WTU3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn8aQ9WTU3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.52■□□□□ 0.4
Scn8aQ9WTU3 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.52■□□□□ 0.4
Scn8aQ9WTU3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Scn8aQ9WTU3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn8aQ9WTU3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn8aQ9WTU3 Gm10566-201ENSMUST00000086739 996 ntBASIC17.52■□□□□ 0.4
Scn8aQ9WTU3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn8aQ9WTU3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn8aQ9WTU3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms