Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Timm23-208ENSMUST00000226683 750 ntBASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom3Q9QXN0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 Gm13559-201ENSMUST00000120476 863 ntBASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom3Q9QXN0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom3Q9QXN0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Shroom3Q9QXN0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shroom3Q9QXN0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shroom3Q9QXN0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Shroom3Q9QXN0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Gm12085-201ENSMUST00000119263 940 ntBASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Gm7367-201ENSMUST00000057611 492 ntBASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom3Q9QXN0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms