Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Sec61a2Q9JLR1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Dio3-201ENSMUST00000097228 1449 ntBASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a2Q9JLR1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a2Q9JLR1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Gm11249-201ENSMUST00000117071 859 ntBASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Gm11927-201ENSMUST00000118472 759 ntBASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a2Q9JLR1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sec61a2Q9JLR1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Gm20760-201ENSMUST00000179197 648 ntBASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms