Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.1□□□□□ -0.15
Trem3Q9JKE1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Gm38285-201ENSMUST00000192928 922 ntBASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Gm42642-201ENSMUST00000200683 355 ntBASIC14.09□□□□□ -0.15
Trem3Q9JKE1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trem3Q9JKE1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trem3Q9JKE1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trem3Q9JKE1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Gm6365-201ENSMUST00000054711 744 ntBASIC14.08□□□□□ -0.16
Trem3Q9JKE1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trem3Q9JKE1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.07□□□□□ -0.16
Trem3Q9JKE1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms