Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Copb1Q9JIF7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Gm27405-201ENSMUST00000184201 112 ntBASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Copb1Q9JIF7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Copb1Q9JIF7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Copb1Q9JIF7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Copb1Q9JIF7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Copb1Q9JIF7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Copb1Q9JIF7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Copb1Q9JIF7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Copb1Q9JIF7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Copb1Q9JIF7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Copb1Q9JIF7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Copb1Q9JIF7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Copb1Q9JIF7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Copb1Q9JIF7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Copb1Q9JIF7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Copb1Q9JIF7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Copb1Q9JIF7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Copb1Q9JIF7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Copb1Q9JIF7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Copb1Q9JIF7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Copb1Q9JIF7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
Copb1Q9JIF7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Copb1Q9JIF7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Copb1Q9JIF7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Copb1Q9JIF7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Copb1Q9JIF7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Copb1Q9JIF7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.06■□□□□ 0.64
Copb1Q9JIF7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Copb1Q9JIF7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms