Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube3bQ9ES34 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ube3bQ9ES34 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ube3bQ9ES34 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ube3bQ9ES34 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube3bQ9ES34 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.73■□□□□ 0.91
Ube3bQ9ES34 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ube3bQ9ES34 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube3bQ9ES34 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ube3bQ9ES34 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ube3bQ9ES34 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube3bQ9ES34 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.72■□□□□ 0.91
Ube3bQ9ES34 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ube3bQ9ES34 Mir5130-201ENSMUST00000175160 84 ntBASIC20.72■□□□□ 0.91
Ube3bQ9ES34 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.72■□□□□ 0.91
Ube3bQ9ES34 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube3bQ9ES34 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube3bQ9ES34 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube3bQ9ES34 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube3bQ9ES34 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Gm16061-201ENSMUST00000122167 857 ntBASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Gm7370-201ENSMUST00000219471 767 ntBASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube3bQ9ES34 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube3bQ9ES34 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.7■□□□□ 0.9
Ube3bQ9ES34 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube3bQ9ES34 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.7■□□□□ 0.9
Ube3bQ9ES34 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube3bQ9ES34 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube3bQ9ES34 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube3bQ9ES34 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube3bQ9ES34 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Ube3bQ9ES34 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube3bQ9ES34 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube3bQ9ES34 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.69■□□□□ 0.9
Ube3bQ9ES34 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ube3bQ9ES34 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube3bQ9ES34 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ube3bQ9ES34 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Ube3bQ9ES34 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube3bQ9ES34 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ube3bQ9ES34 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.69■□□□□ 0.9
Ube3bQ9ES34 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.68■□□□□ 0.9
Ube3bQ9ES34 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube3bQ9ES34 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube3bQ9ES34 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube3bQ9ES34 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ube3bQ9ES34 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.68■□□□□ 0.9
Ube3bQ9ES34 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ube3bQ9ES34 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube3bQ9ES34 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ube3bQ9ES34 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ube3bQ9ES34 Gm13474-201ENSMUST00000122466 815 ntBASIC20.67■□□□□ 0.9
Ube3bQ9ES34 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ube3bQ9ES34 Gm18032-201ENSMUST00000222541 538 ntBASIC20.67■□□□□ 0.9
Ube3bQ9ES34 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ube3bQ9ES34 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ube3bQ9ES34 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Ube3bQ9ES34 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ube3bQ9ES34 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ube3bQ9ES34 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube3bQ9ES34 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.66■□□□□ 0.9
Ube3bQ9ES34 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ube3bQ9ES34 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube3bQ9ES34 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.66■□□□□ 0.9
Ube3bQ9ES34 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.66■□□□□ 0.9
Ube3bQ9ES34 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube3bQ9ES34 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube3bQ9ES34 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ube3bQ9ES34 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.64■□□□□ 0.9
Ube3bQ9ES34 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ube3bQ9ES34 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ube3bQ9ES34 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ube3bQ9ES34 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ube3bQ9ES34 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms