Protein–RNA interactions for Protein: Q9DC28

Csnk1d, Casein kinase I isoform delta, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1dQ9DC28 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Csnk1dQ9DC28 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Csnk1dQ9DC28 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.29■□□□□ 0.36
Csnk1dQ9DC28 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Csnk1dQ9DC28 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Csnk1dQ9DC28 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.29■□□□□ 0.36
Csnk1dQ9DC28 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Csnk1dQ9DC28 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Csnk1dQ9DC28 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.29■□□□□ 0.36
Csnk1dQ9DC28 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Csnk1dQ9DC28 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Csnk1dQ9DC28 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Rarb-207ENSMUST00000225921 2756 ntBASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Csnk1dQ9DC28 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Csnk1dQ9DC28 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Csnk1dQ9DC28 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Csnk1dQ9DC28 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Csnk1dQ9DC28 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.27■□□□□ 0.36
Csnk1dQ9DC28 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Csnk1dQ9DC28 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Csnk1dQ9DC28 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.27■□□□□ 0.36
Csnk1dQ9DC28 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Csnk1dQ9DC28 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Csnk1dQ9DC28 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Csnk1dQ9DC28 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Csnk1dQ9DC28 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Csnk1dQ9DC28 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.27■□□□□ 0.35
Csnk1dQ9DC28 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.27■□□□□ 0.35
Csnk1dQ9DC28 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Csnk1dQ9DC28 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Csnk1dQ9DC28 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Gm2274-201ENSMUST00000184539 609 ntBASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Csnk1dQ9DC28 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Mir7071-201ENSMUST00000184847 69 ntBASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Csnk1dQ9DC28 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Csnk1dQ9DC28 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Csnk1dQ9DC28 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.23■□□□□ 0.35
Csnk1dQ9DC28 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Csnk1dQ9DC28 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Csnk1dQ9DC28 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms