Protein–RNA interactions for Protein: Q9D9V3

Echdc1, Ethylmalonyl-CoA decarboxylase, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc1Q9D9V3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Echdc1Q9D9V3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Echdc1Q9D9V3 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.71■■□□□ 1.07
Echdc1Q9D9V3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Echdc1Q9D9V3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Echdc1Q9D9V3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Echdc1Q9D9V3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Echdc1Q9D9V3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Echdc1Q9D9V3 Gm13474-201ENSMUST00000122466 815 ntBASIC21.7■■□□□ 1.06
Echdc1Q9D9V3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Echdc1Q9D9V3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Echdc1Q9D9V3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Echdc1Q9D9V3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Echdc1Q9D9V3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Echdc1Q9D9V3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Echdc1Q9D9V3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.69■■□□□ 1.06
Echdc1Q9D9V3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Echdc1Q9D9V3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Echdc1Q9D9V3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Echdc1Q9D9V3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Echdc1Q9D9V3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Echdc1Q9D9V3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Echdc1Q9D9V3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Echdc1Q9D9V3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Echdc1Q9D9V3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Echdc1Q9D9V3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Echdc1Q9D9V3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Echdc1Q9D9V3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Echdc1Q9D9V3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.68■■□□□ 1.06
Echdc1Q9D9V3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Echdc1Q9D9V3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Echdc1Q9D9V3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Gm8969-201ENSMUST00000199694 526 ntBASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Echdc1Q9D9V3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Gm6659-201ENSMUST00000174752 547 ntBASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Echdc1Q9D9V3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Echdc1Q9D9V3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Echdc1Q9D9V3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Echdc1Q9D9V3 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.64■■□□□ 1.05
Echdc1Q9D9V3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.64■■□□□ 1.05
Echdc1Q9D9V3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.64■■□□□ 1.05
Echdc1Q9D9V3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.64■■□□□ 1.05
Echdc1Q9D9V3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Echdc1Q9D9V3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Echdc1Q9D9V3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Echdc1Q9D9V3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.64■■□□□ 1.05
Echdc1Q9D9V3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Echdc1Q9D9V3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 Gm10013-201ENSMUST00000106074 672 ntBASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Echdc1Q9D9V3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms