Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chaf1bQ9D0N7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chaf1bQ9D0N7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Nespas-201ENSMUST00000143738 1083 ntBASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chaf1bQ9D0N7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Chaf1bQ9D0N7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chaf1bQ9D0N7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chaf1bQ9D0N7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Gm6420-201ENSMUST00000193885 723 ntBASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Chaf1bQ9D0N7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.38■□□□□ 0.21
Chaf1bQ9D0N7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms