Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc3Q9CW03 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Smc3Q9CW03 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc3Q9CW03 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.49■□□□□ 0.87
Smc3Q9CW03 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc3Q9CW03 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc3Q9CW03 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smc3Q9CW03 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc3Q9CW03 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc3Q9CW03 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Smc3Q9CW03 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Smc3Q9CW03 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Smc3Q9CW03 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc3Q9CW03 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.48■□□□□ 0.87
Smc3Q9CW03 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.48■□□□□ 0.87
Smc3Q9CW03 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Mtag2-201ENSMUST00000058665 714 ntBASIC20.48■□□□□ 0.87
Smc3Q9CW03 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc3Q9CW03 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smc3Q9CW03 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.46■□□□□ 0.87
Smc3Q9CW03 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Smc3Q9CW03 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc3Q9CW03 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc3Q9CW03 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc3Q9CW03 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smc3Q9CW03 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc3Q9CW03 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smc3Q9CW03 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smc3Q9CW03 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Smc3Q9CW03 Gm13401-201ENSMUST00000117074 291 ntBASIC20.45■□□□□ 0.86
Smc3Q9CW03 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
Smc3Q9CW03 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc3Q9CW03 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc3Q9CW03 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc3Q9CW03 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms