Protein–RNA interactions for Protein: Q9CQX0

Otub2, Ubiquitin thioesterase OTUB2, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub2Q9CQX0 Gm22697-201ENSMUST00000175194 63 ntBASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Otub2Q9CQX0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Gm17661-201ENSMUST00000170317 270 ntBASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otub2Q9CQX0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 AA414768-201ENSMUST00000121924 1257 ntBASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Otub2Q9CQX0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Otub2Q9CQX0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Mir1668-201ENSMUST00000184114 107 ntBASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Otub2Q9CQX0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otub2Q9CQX0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Otub2Q9CQX0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Otub2Q9CQX0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Otub2Q9CQX0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otub2Q9CQX0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otub2Q9CQX0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otub2Q9CQX0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otub2Q9CQX0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otub2Q9CQX0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Otub2Q9CQX0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Otub2Q9CQX0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms