Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Mir1668-201ENSMUST00000184114 107 ntBASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Prpf8Q99PV0 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf8Q99PV0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Gm13474-201ENSMUST00000122466 815 ntBASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.21□□□□□ -0.13
Prpf8Q99PV0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf8Q99PV0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Prpf8Q99PV0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf8Q99PV0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf8Q99PV0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf8Q99PV0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf8Q99PV0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms