Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim11Q99PQ2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim11Q99PQ2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim11Q99PQ2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim11Q99PQ2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim11Q99PQ2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim11Q99PQ2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim11Q99PQ2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim11Q99PQ2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim11Q99PQ2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim11Q99PQ2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Gm27275-201ENSMUST00000184318 272 ntBASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Gm20049-201ENSMUST00000219950 730 ntBASIC19.84■□□□□ 0.77
Trim11Q99PQ2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim11Q99PQ2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim11Q99PQ2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim11Q99PQ2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim11Q99PQ2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim11Q99PQ2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim11Q99PQ2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim11Q99PQ2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim11Q99PQ2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.83■□□□□ 0.77
Trim11Q99PQ2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim11Q99PQ2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.83■□□□□ 0.77
Trim11Q99PQ2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim11Q99PQ2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.83■□□□□ 0.76
Trim11Q99PQ2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Trim11Q99PQ2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim11Q99PQ2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim11Q99PQ2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trim11Q99PQ2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.83■□□□□ 0.76
Trim11Q99PQ2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim11Q99PQ2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim11Q99PQ2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trim11Q99PQ2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim11Q99PQ2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim11Q99PQ2 Gm6576-201ENSMUST00000169678 883 ntBASIC19.82■□□□□ 0.76
Trim11Q99PQ2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim11Q99PQ2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim11Q99PQ2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim11Q99PQ2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim11Q99PQ2 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim11Q99PQ2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim11Q99PQ2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms