Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.04■□□□□ 0.32
Trim16Q99PP9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim16Q99PP9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.04■□□□□ 0.32
Trim16Q99PP9 Flg-201ENSMUST00000050758 1488 ntBASIC17.04■□□□□ 0.32
Trim16Q99PP9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.04■□□□□ 0.32
Trim16Q99PP9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim16Q99PP9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.03■□□□□ 0.32
Trim16Q99PP9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Gm27275-201ENSMUST00000184318 272 ntBASIC17.03■□□□□ 0.32
Trim16Q99PP9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.03■□□□□ 0.32
Trim16Q99PP9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim16Q99PP9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim16Q99PP9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim16Q99PP9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim16Q99PP9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim16Q99PP9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim16Q99PP9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim16Q99PP9 Gm10653-202ENSMUST00000139570 835 ntBASIC17.02■□□□□ 0.32
Trim16Q99PP9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.02■□□□□ 0.32
Trim16Q99PP9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim16Q99PP9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim16Q99PP9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim16Q99PP9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim16Q99PP9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim16Q99PP9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim16Q99PP9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim16Q99PP9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Gm11927-201ENSMUST00000118472 759 ntBASIC17.01■□□□□ 0.31
Trim16Q99PP9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim16Q99PP9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.01■□□□□ 0.31
Trim16Q99PP9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.01■□□□□ 0.31
Trim16Q99PP9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim16Q99PP9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trim16Q99PP9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Gm11249-201ENSMUST00000117071 859 ntBASIC17■□□□□ 0.31
Trim16Q99PP9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim16Q99PP9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Tgds-204ENSMUST00000228543 1594 ntBASIC17■□□□□ 0.31
Trim16Q99PP9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim16Q99PP9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim16Q99PP9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms