Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Gm10060-201ENSMUST00000212002 111 ntBASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Tgds-204ENSMUST00000228543 1594 ntBASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh23Q99PF4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Gm5264-201ENSMUST00000190584 848 ntBASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh23Q99PF4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Gm6736-201ENSMUST00000166583 948 ntBASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Iqck-206ENSMUST00000208658 2891 ntBASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh23Q99PF4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh23Q99PF4 Gm1401-201ENSMUST00000122048 772 ntBASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Gm5364-201ENSMUST00000216789 889 ntBASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh23Q99PF4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh23Q99PF4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh23Q99PF4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh23Q99PF4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.77■□□□□ 0.43
Cdh23Q99PF4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh23Q99PF4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh23Q99PF4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh23Q99PF4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh23Q99PF4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh23Q99PF4 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms