Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cstf1Q99LC2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cstf1Q99LC2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Gm18115-201ENSMUST00000221209 621 ntBASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cstf1Q99LC2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.34■□□□□ 0.37
Cstf1Q99LC2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cstf1Q99LC2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cstf1Q99LC2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cstf1Q99LC2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cstf1Q99LC2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Cstf1Q99LC2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cstf1Q99LC2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.33■□□□□ 0.37
Cstf1Q99LC2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cstf1Q99LC2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cstf1Q99LC2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.33■□□□□ 0.36
Cstf1Q99LC2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cstf1Q99LC2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cstf1Q99LC2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cstf1Q99LC2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cstf1Q99LC2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cstf1Q99LC2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cstf1Q99LC2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Gm6623-201ENSMUST00000173570 544 ntBASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Gm27357-201ENSMUST00000183754 135 ntBASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Gm27742-201ENSMUST00000184667 60 ntBASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cstf1Q99LC2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cstf1Q99LC2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cstf1Q99LC2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms