Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd2Q99JR8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Gm18958-201ENSMUST00000174258 762 ntBASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Actl10-202ENSMUST00000226583 1501 ntBASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Fst-202ENSMUST00000223640 2612 ntBASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Idnk-204ENSMUST00000226010 1898 ntBASIC17.61■□□□□ 0.41
Smarcd2Q99JR8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd2Q99JR8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarcd2Q99JR8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcd2Q99JR8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.58■□□□□ 0.41
Smarcd2Q99JR8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcd2Q99JR8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Gm6623-201ENSMUST00000173570 544 ntBASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd2Q99JR8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms