Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha11Q91Y19 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha11Q91Y19 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.33■□□□□ 0.53
Pcdha11Q91Y19 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha11Q91Y19 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdha11Q91Y19 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha11Q91Y19 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdha11Q91Y19 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha11Q91Y19 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdha11Q91Y19 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha11Q91Y19 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha11Q91Y19 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha11Q91Y19 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha11Q91Y19 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha11Q91Y19 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha11Q91Y19 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha11Q91Y19 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha11Q91Y19 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha11Q91Y19 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha11Q91Y19 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.32■□□□□ 0.52
Pcdha11Q91Y19 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha11Q91Y19 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.32■□□□□ 0.52
Pcdha11Q91Y19 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha11Q91Y19 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha11Q91Y19 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Gm43799-201ENSMUST00000201845 579 ntBASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha11Q91Y19 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha11Q91Y19 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Mir8112-201ENSMUST00000184382 131 ntBASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdha11Q91Y19 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Gm11539-201ENSMUST00000119837 557 ntBASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Gm13436-201ENSMUST00000120418 567 ntBASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Gm27463-201ENSMUST00000183569 57 ntBASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms