Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.2■□□□□ 0.5
Pcdha3Q91Y16 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Mir8112-201ENSMUST00000184382 131 ntBASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Gm37292-201ENSMUST00000192062 758 ntBASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pcdha3Q91Y16 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.18■□□□□ 0.5
Pcdha3Q91Y16 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha3Q91Y16 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha3Q91Y16 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha3Q91Y16 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcdha3Q91Y16 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha3Q91Y16 Gm29791-202ENSMUST00000207888 369 ntBASIC18.18■□□□□ 0.5
Pcdha3Q91Y16 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha3Q91Y16 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha3Q91Y16 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha3Q91Y16 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdha3Q91Y16 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha3Q91Y16 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdha3Q91Y16 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms