Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb22Q91XZ8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb22Q91XZ8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdhb22Q91XZ8 Gm3375-201ENSMUST00000203929 796 ntBASIC20.34■□□□□ 0.85
Pcdhb22Q91XZ8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb22Q91XZ8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb22Q91XZ8 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.34■□□□□ 0.85
Pcdhb22Q91XZ8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb22Q91XZ8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb22Q91XZ8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb22Q91XZ8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb22Q91XZ8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Gm37025-201ENSMUST00000195159 829 ntBASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.33■□□□□ 0.85
Pcdhb22Q91XZ8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Pcdhb22Q91XZ8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb22Q91XZ8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.33■□□□□ 0.84
Pcdhb22Q91XZ8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb22Q91XZ8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb22Q91XZ8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb22Q91XZ8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb22Q91XZ8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb22Q91XZ8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Gm17661-201ENSMUST00000170317 270 ntBASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb22Q91XZ8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms