Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Gm13168-201ENSMUST00000121771 632 ntBASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb6Q91XZ4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb6Q91XZ4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb6Q91XZ4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Pcdhb6Q91XZ4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb6Q91XZ4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb6Q91XZ4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb6Q91XZ4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb6Q91XZ4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Gm24841-201ENSMUST00000158676 357 ntBASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb6Q91XZ4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Gm8520-201ENSMUST00000186517 868 ntBASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhb6Q91XZ4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms