Protein–RNA interactions for Protein: Q91WA3

Hdac11, Histone deacetylase 11, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac11Q91WA3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac11Q91WA3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac11Q91WA3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac11Q91WA3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac11Q91WA3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hdac11Q91WA3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.34■□□□□ 0.37
Hdac11Q91WA3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac11Q91WA3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac11Q91WA3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac11Q91WA3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac11Q91WA3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.33■□□□□ 0.37
Hdac11Q91WA3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac11Q91WA3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Hdac11Q91WA3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac11Q91WA3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Hdac11Q91WA3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac11Q91WA3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Gm12527-201ENSMUST00000117967 564 ntBASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.33■□□□□ 0.36
Hdac11Q91WA3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac11Q91WA3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac11Q91WA3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Gm11249-201ENSMUST00000117071 859 ntBASIC17.31■□□□□ 0.36
Hdac11Q91WA3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.31■□□□□ 0.36
Hdac11Q91WA3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac11Q91WA3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Gm27275-201ENSMUST00000184318 272 ntBASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Gm37856-201ENSMUST00000191634 999 ntBASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac11Q91WA3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac11Q91WA3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac11Q91WA3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms