Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trim60Q8VI40 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trim60Q8VI40 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim60Q8VI40 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.05■□□□□ 0.48
Trim60Q8VI40 Gm26571-201ENSMUST00000181399 666 ntBASIC18.05■□□□□ 0.48
Trim60Q8VI40 Rab3c-203ENSMUST00000224180 967 ntBASIC18.05■□□□□ 0.48
Trim60Q8VI40 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim60Q8VI40 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim60Q8VI40 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim60Q8VI40 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Trim60Q8VI40 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim60Q8VI40 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim60Q8VI40 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim60Q8VI40 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim60Q8VI40 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Mir2861-201ENSMUST00000175539 82 ntBASIC18.04■□□□□ 0.48
Trim60Q8VI40 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim60Q8VI40 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.03■□□□□ 0.48
Trim60Q8VI40 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.03■□□□□ 0.48
Trim60Q8VI40 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.03■□□□□ 0.48
Trim60Q8VI40 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim60Q8VI40 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Trim60Q8VI40 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim60Q8VI40 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim60Q8VI40 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim60Q8VI40 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim60Q8VI40 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim60Q8VI40 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim60Q8VI40 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim60Q8VI40 Mir5133-201ENSMUST00000174955 77 ntBASIC18.02■□□□□ 0.48
Trim60Q8VI40 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.02■□□□□ 0.48
Trim60Q8VI40 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim60Q8VI40 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim60Q8VI40 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.01■□□□□ 0.47
Trim60Q8VI40 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim60Q8VI40 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.01■□□□□ 0.47
Trim60Q8VI40 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.01■□□□□ 0.47
Trim60Q8VI40 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim60Q8VI40 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Trim60Q8VI40 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim60Q8VI40 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim60Q8VI40 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Gm11927-201ENSMUST00000118472 759 ntBASIC18■□□□□ 0.47
Trim60Q8VI40 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms