Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cspg4Q8VHY0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cspg4Q8VHY0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cspg4Q8VHY0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cspg4Q8VHY0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cspg4Q8VHY0 Gm23935-201ENSMUST00000102303 57 ntBASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Gm24270-201ENSMUST00000102326 57 ntBASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Gm24245-201ENSMUST00000157318 57 ntBASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Cspg4Q8VHY0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Gm10175-201ENSMUST00000086013 645 ntBASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cspg4Q8VHY0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cspg4Q8VHY0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Gm8000-201ENSMUST00000188378 592 ntBASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Gm15794-201ENSMUST00000120182 631 ntBASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cspg4Q8VHY0 Rps4l-201ENSMUST00000071745 943 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms