Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Mir8112-201ENSMUST00000184382 131 ntBASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim29Q8R2Q0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Gm18025-201ENSMUST00000221733 862 ntBASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim29Q8R2Q0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Gm6576-201ENSMUST00000169678 883 ntBASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.9■□□□□ 0.78
Trim29Q8R2Q0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trim29Q8R2Q0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Gm42545-201ENSMUST00000202755 922 ntBASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Trim29Q8R2Q0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Trim29Q8R2Q0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim29Q8R2Q0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim29Q8R2Q0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trim29Q8R2Q0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim29Q8R2Q0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trim29Q8R2Q0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim29Q8R2Q0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim29Q8R2Q0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim29Q8R2Q0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms