Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Gm42778-201ENSMUST00000199644 553 ntBASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nudcd3Q8R1N4 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.46■□□□□ 0.38
Nudcd3Q8R1N4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nudcd3Q8R1N4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nudcd3Q8R1N4 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nudcd3Q8R1N4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nudcd3Q8R1N4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nudcd3Q8R1N4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nudcd3Q8R1N4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nudcd3Q8R1N4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nudcd3Q8R1N4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nudcd3Q8R1N4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nudcd3Q8R1N4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nudcd3Q8R1N4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nudcd3Q8R1N4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nudcd3Q8R1N4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms